Journal: bioRxiv
Article Title: Brain endothelial PRMT5-ANGPTL4 axis regulates cerebellar inhibitory synaptogenesis and motor coordination
doi: 10.1101/2025.11.18.688985
Figure Lengend Snippet: (A) UMAP visualization of scRNA-seq data from cerebellar ECs in P20 Prmt5 fl/+ and Prmt5 fl/fl mice, with colors corresponding to the identified clusters. (B) Dot plots showing the expression of specific marker genes in each cluster. (C) Count of significant DEGs in each cluster, with upregulation indicated in orange and downregulation in blue (average |log2FC| > 0.5, adjusted p-value < 0.05). (D) Representative gene ontology (cellular component) analysis of endothelial clusters. Dot size represents the overlap proportion between DEGs and reference gene sets; color intensity reflects -log10 (q-value). (E) Volcano plot showing DEGs encoding ECM components across 6 endothelial clusters. The top 5 genes with the greatest expression differences are labeled. (F) Venn diagram showing intersections among the top 5 genes across 6 endothelial clusters, with overlaps representing shared gene counts. (G) qPCR analysis of Angptl4 mRNA levels in brain ECs derived from P20 Prmt5 fl/+ and Prmt5 fl/fl mice. **P < 0.01 (mean ± SEM, n = 3 per group). (H) Western blot analysis of ANGPTL4 protein expression in brain ECs derived from P20 Prmt5 fl/+ and Prmt5 fl/fl mice. (I) ELISA analysis of secreted ANGPTL4 protein levels. **P < 0.01 (mean ± SEM, n = 3 per group). (J) ChIP-qPCR analysis of PRMT5 occupancy on the Angptl4 promoter region in bEnd.3 cells. ****P < 0.0001 (mean ± SEM, n = 3 per group). (K) qPCR analysis of Prmt5 and Angptl4 mRNA levels in bEnd.3 cells transfected with siNC or siPrmt5 . ***P < 0.001 (mean ± SEM, n = 3 per group). (L) Western blot analysis of PRMT5 and ANGPTL4 protein levels in bEnd.3 cells transfected with siNC or siPrmt5 . GAPDH served as the loading control. (M-O) ChIP-qPCR analysis of the enrichment of H3R8me2s (M), H4R3me2s (N) and H3K9ac (O) at the Angptl4 promoter region in bEnd.3 cells transfected with siNC or siPrmt5 . **P < 0.01, ****P < 0.0001 (mean ± SEM, n = 3 per group).
Article Snippet: Mouse embryonic fibroblasts (NIH-3T3 cells, ATCC, CRL-1658) and mouse brain endothelial cells (bEnd.3 cells, ATCC, CRL-2299) were cultured at 37 °C in a humidified atmosphere containing 5% CO2.
Techniques: Expressing, Marker, Labeling, Derivative Assay, Western Blot, Enzyme-linked Immunosorbent Assay, ChIP-qPCR, Transfection, Control